【Abstract】in 1937 the American nationality Austria biologist bright Philippines proposed the general system theory principle. In the system each essential factor all is in the certain position，is playing the specific role. In ontogenesis，gene according to certain when，the spatial order have the choice expression. The gene is composes the chromosome the hereditary unit，and the proof gene makes the line spread in the chromosome. The certain gene under the certain condition，is controlling the certain metabolism process，thus manifests in the certain heredity characteristic and in the characteristic performance The gene also passable sudden change has changed. Along with the human gene spectrum gradually expounded，the genetic engineering technology full development，the gene treatment very possibly treats at the clinical disease has the revolutionary change，this needs the researcher in the practice，with natural diagnostic method system theory theory，guiding ideology，development research mentality，thus solves this single layer big difficult problem.
【Key word】system theory；Gene and heredity；Gene treatment
